Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015801180.1_cds_XP_016473203.1_6507
CDS Infomation

[gene=LOC107795132] [db_xref=GeneID:107795132] [protein=probable arabinosyltransferase ARAD1] [protein_id=XP_016473203.1] [location=complement(join(30178..30705,31773..32735))] [gbkey=CDS]
Sequence

ATGTCTCTGATTCCTGATAAAAGCATGTTACCTTCAAGGTCTCTGTCCTGTCTAATAGCC
ATTTCTGTTTTCCTTTTGATAATTTCTTCACTTTCCCTTCTTCAATTTGCTGACAATTCT
TTCATACCCAGATCAGTTTTTAGTTTAATTCTTGCTAATAGTACATCCGTTTACTTGACC
TCAAGTGGAGAATCTAAAGCTCCTTTCTTGCCTATTGAAACTTCACATGAACAAATCCTG
AAAAGCCAAGAGTTAGCTTGTCACACTTCCAGTTTCAGCAATGATAATGTTGGATTCGGA
GTTGGGAAAACTTGTGGCCCGAAACGAGCTCTTCTTAAAGTGTATATGTATGACTTACCT
CCTGAATTTCACTTTGGGCTATTAGGTTGGAAAGGAAGTAGGGACCAAACATGGCCTAGT
GTTGGTAACCCGAGCCAAATACCCTCATATCCTGGTGGCTTGAATTTGCAGCACAGCATT
GAATATTGGCTTACCCTTGACCTTCTATCCTCAAACTCCCCAAATATTAATAGACCATGC
ACTGCTGTCAGGGTGCTGAATTCGAGTGAAGCAGATGTAATTTTTGTGCCCTTCTTTTCG
TCTTTGAGTTACAATAGGCATTCGAAGGTTCAAGGGAAGGAAAAAATCAGTCTCGATAGA
GTGCTGCAGGATAAAGTGGTGGACTTTTTAAAAAGTAGAGATGAGTGGAAGCGAAGGGGT
GGAAAGGATCATGTAATTGTTGCTCACCACCCCAATAGTATGTTGGATGCAAGAGAGAAG
CTAGGTTCCACCATGTTTGTACTTGCAGATTTTGGAAGGTATAGAGCCGAAATAGCAAAT
ATTGGAAAGGATGTGATTGCTCCTTACAAACATATGGTCCAGACAATAGGTGCTGGCAAC
TCACCCTCTTTCAGACAACGGAATACGTTAGTTTACTTTCAAGGGGCAATCTATCGAAAA
GATGGTGGAGAGATTCGTCAAAATTTATACAACCTTCTCAAAGATGAAAAGGATGTACAC
TTCACATTTGGAAGCATTCAAGCAAATGGTGTCAGGGAGGCTGGAAGAGGAATGGCATCG
TCCAAATTCTGCCTGAATATTGCTGGAGACACTCCCTCTTCAAATCGTCTCTTTGATGCC
ATTGCTAGCCACTGTATTCCGGTTATAATTAGTGATGAGATTGAGCTACCATTTGAAGAC
GTTCTCGATTACTCAGAGTTCTGTGTGTTTGTAAATTCATCTGATGCTGTAAAGAAGGGC
TACCTTCTGAACCTTCTTAGAGAAATGAAGGAAGATCAGTGGACCAAAATGTGGGAAAGG
ATAAAGGTGCTCAGCAAACATTTTGACTATCAATATCCATCCCAAACTGGTGATGCAGTG
GATATGATTTGGCAGGCAGTTTCAAGAAAGGTGTCATCTATACAACTGAAGGATCATCGC
GACAAAAGATACCACAGGTCGCAGCTTTTCCTCAAAGACCAGATGTCATGA

Peptide Sequence

PEP ID

XP_016473203.1
PEP Infomation

PREDICTED: probable arabinosyltransferase ARAD1 [Nicotiana tabacum]
Sequence

MSLIPDKSMLPSRSLSCLIAISVFLLIISSLSLLQFADNSFIPRSVFSLILANSTSVYLT
SSGESKAPFLPIETSHEQILKSQELACHTSSFSNDNVGFGVGKTCGPKRALLKVYMYDLP
PEFHFGLLGWKGSRDQTWPSVGNPSQIPSYPGGLNLQHSIEYWLTLDLLSSNSPNINRPC
TAVRVLNSSEADVIFVPFFSSLSYNRHSKVQGKEKISLDRVLQDKVVDFLKSRDEWKRRG
GKDHVIVAHHPNSMLDAREKLGSTMFVLADFGRYRAEIANIGKDVIAPYKHMVQTIGAGN
SPSFRQRNTLVYFQGAIYRKDGGEIRQNLYNLLKDEKDVHFTFGSIQANGVREAGRGMAS
SKFCLNIAGDTPSSNRLFDAIASHCIPVIISDEIELPFEDVLDYSEFCVFVNSSDAVKKG
YLLNLLREMKEDQWTKMWERIKVLSKHFDYQYPSQTGDAVDMIWQAVSRKVSSIQLKDHR
DKRYHRSQLFLKDQMS

Transcript Sequence

Gene sequence data has not been registered.